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  • Top cofit genes for CSW01_00835 from Vibrio cholerae E7946 ATCC 55056

    HTH-type transcriptional activator IlvY
    SEED: HTH-type transcriptional regulator IlvY
    KEGG: LysR family transcriptional regulator, positive regulator for ilvC

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00140 dihydroxy-acid dehydratase 0.99 0.65
    2 CSW01_16660 hypothetical protein no 0.59
    3 CSW01_19330 gfo/Idh/MocA family oxidoreductase no 0.57
    4 CSW01_14815 hypothetical protein 0.13 0.54
    5 CSW01_00145 branched-chain-amino-acid transaminase 0.98 0.52
    6 CSW01_06755 acetate--CoA ligase 0.29 0.51
    7 CSW01_10815 Cys-tRNA(Pro) deacylase 0.32 0.50
    8 CSW01_16995 MFS transporter no 0.49
    9 CSW01_06495 chitooligosaccharide deacetylase no 0.49
    10 CSW01_12980 ATP-dependent RNA helicase DbpA 0.42 0.49
    11 CSW01_05655 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.88 0.48
    12 CSW01_06675 (Na+)-NQR maturation NqrM no 0.48
    13 CSW01_01470 permease 0.64 0.48
    14 CSW01_17225 putative 2-aminoethylphosphonate ABC transporter permease subunit no 0.47
    15 CSW01_01020 hypothetical protein no 0.45
    16 CSW01_00330 fluoride efflux transporter CrcB no 0.45
    17 CSW01_06205 thiopurine S-methyltransferase no 0.45
    18 CSW01_11875 PilZ domain-containing protein no 0.44
    19 CSW01_02940 oxaloacetate decarboxylase subunit gamma no 0.44
    20 CSW01_19590 two-component sensor histidine kinase no 0.44

    Or look for negative cofitness