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  • Top cofit genes for CSW01_00785 from Vibrio cholerae E7946 ATCC 55056

    tRNA (uridine(54)-C5)-methyltransferase TrmA
    KEGG: tRNA (uracil-5-)-methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00735 DUF1145 domain-containing protein no 0.53
    2 CSW01_11680 protein BolA 0.64 0.53
    3 CSW01_16575 acetyltransferase no 0.51
    4 CSW01_04525 DUF188 domain-containing protein 0.17 0.50
    5 CSW01_09855 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase no 0.50
    6 CSW01_03930 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.64 0.49
    7 CSW01_14700 MFS transporter 0.33 0.47
    8 CSW01_13845 hypothetical protein no 0.45
    9 CSW01_09640 C4-dicarboxylate ABC transporter permease 0.67 0.45
    10 CSW01_08375 CDP-alcohol phosphatidyltransferase family protein no 0.44
    11 CSW01_09270 EAL domain-containing protein no 0.44
    12 CSW01_19120 branched-chain amino acid ABC transporter permease no 0.43
    13 CSW01_02680 WYL domain-containing protein no 0.43
    14 CSW01_06650 DUF535 domain-containing protein no 0.43
    15 CSW01_03875 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ 0.35 0.42
    16 CSW01_13325 pilus assembly protein PilN no 0.42
    17 CSW01_01825 DNA mismatch repair protein MutL 0.48 0.42
    18 CSW01_09945 NADPH-dependent 2,4-dienoyl-CoA reductase 0.22 0.41
    19 CSW01_11700 hypothetical protein no 0.41
    20 CSW01_01800 tRNA-Met no 0.40

    Or look for negative cofitness