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  • Top cofit genes for CSW01_00660 from Vibrio cholerae E7946 ATCC 55056

    sensor domain-containing phosphodiesterase
    SEED: Sensory box/GGDEF family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12415 two-component sensor histidine kinase BarA no 0.62
    2 CSW01_13865 nitrogen regulation protein NR(I) no 0.61
    3 CSW01_11520 bifunctional uridylyltransferase/uridylyl-removing protein GlnD no 0.53
    4 CSW01_13395 PadR family transcriptional regulator no 0.52
    5 CSW01_13840 translational GTPase TypA no 0.50
    6 CSW01_01825 DNA mismatch repair protein MutL no 0.49
    7 CSW01_09270 EAL domain-containing protein no 0.44
    8 CSW01_13345 glutathione peroxidase no 0.42
    9 CSW01_06465 BCCT family transporter no 0.42
    10 CSW01_03705 chaperone protein ClpB no 0.42
    11 CSW01_04030 iron ABC transporter permease no 0.41
    12 CSW01_14890 peptidase T no 0.41
    13 CSW01_12565 acetolactate synthase 3 large subunit no 0.41
    14 CSW01_05520 two-component sensor histidine kinase no 0.40
    15 CSW01_08280 hypothetical protein no 0.39
    16 CSW01_12340 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase no 0.39
    17 CSW01_06500 LacI family transcriptional regulator no 0.39
    18 CSW01_00705 DUF2500 domain-containing protein no 0.39
    19 CSW01_05795 cold-shock protein CspD no 0.39
    20 CSW01_01965 glucose-6-phosphate isomerase no 0.38

    Or look for negative cofitness