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  • Top cofit genes for CSW01_00635 from Vibrio cholerae E7946 ATCC 55056

    diaminopimelate decarboxylase
    SEED: Diaminopimelate decarboxylase (EC 4.1.1.20)
    KEGG: diaminopimelate decarboxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_07490 dihydroorotate dehydrogenase (quinone) 0.95 0.67
    2 CSW01_05555 oligopeptide ABC transporter permease OppC 0.65 0.53
    3 CSW01_12105 carbamoyl-phosphate synthase small subunit 0.95 0.53
    4 CSW01_18660 glycerate kinase no 0.52
    5 CSW01_18760 dihydroorotase 0.93 0.49
    6 CSW01_13245 arginine N-succinyltransferase no 0.49
    7 CSW01_00265 5-(carboxyamino)imidazole ribonucleotide mutase 0.90 0.49
    8 CSW01_19445 1-pyrroline-5-carboxylate dehydrogenase no 0.48
    9 CSW01_01585 NAD(P)H-flavin reductase 0.67 0.46
    10 CSW01_14185 chitinase no 0.46
    11 CSW01_13250 aspartate aminotransferase family protein 0.98 0.46
    12 CSW01_12725 aspartate carbamoyltransferase 0.95 0.45
    13 CSW01_13240 N-succinylglutamate 5-semialdehyde dehydrogenase no 0.45
    14 CSW01_01525 3'-5' exonuclease no 0.44
    15 CSW01_19450 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA 0.45 0.43
    16 CSW01_05565 ABC transporter ATP-binding protein 0.37 0.43
    17 CSW01_18950 GGDEF domain-containing protein no 0.43
    18 CSW01_12100 carbamoyl-phosphate synthase large chain 0.96 0.42
    19 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ no 0.42
    20 CSW01_15350 glycine cleavage system aminomethyltransferase T 0.55 0.42

    Or look for negative cofitness