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  • Top cofit genes for CSW01_00270 from Vibrio cholerae E7946 ATCC 55056

    threonylcarbamoyl-AMP synthase
    SEED: TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA
    KEGG: putative translation factor

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_01625 N-acetyltransferase no 0.67
    2 CSW01_12580 glycosyltransferase no 0.56
    3 CSW01_03705 chaperone protein ClpB no 0.55
    4 CSW01_12350 methyl-accepting chemotaxis protein no 0.49
    5 CSW01_10365 VOC family protein no 0.48
    6 CSW01_15080 methyl-accepting chemotaxis protein HlyB no 0.48
    7 CSW01_04785 undecaprenyl-phosphate glucose phosphotransferase no 0.48
    8 CSW01_00805 RNA-binding protein no 0.48
    9 CSW01_12565 acetolactate synthase 3 large subunit no 0.47
    10 CSW01_03820 hydrogen peroxide-inducible genes activator no 0.46
    11 CSW01_00705 DUF2500 domain-containing protein no 0.46
    12 CSW01_03430 U32 family peptidase no 0.45
    13 CSW01_03830 isocitrate lyase no 0.45
    14 CSW01_14895 mechanosensitive ion channel family protein no 0.44
    15 CSW01_16885 pyruvate:ferredoxin (flavodoxin) oxidoreductase no 0.44
    16 CSW01_01825 DNA mismatch repair protein MutL no 0.44
    17 CSW01_00050 amino acid ABC transporter substrate-binding protein no 0.44
    18 CSW01_08050 chemotaxis protein CheV no 0.44
    19 CSW01_05205 hypothetical protein no 0.44
    20 CSW01_04970 hypothetical protein no 0.43

    Or look for negative cofitness