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  • Top cofit genes for CSW01_00255 from Vibrio cholerae E7946 ATCC 55056

    DNA topoisomerase
    SEED: Similar to C-terminal Zn-finger domain of DNA topoisomerase I
    KEGG: putative DNA topoisomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_08180 Na+/H+ antiporter NhaA 0.66 0.48
    2 CSW01_07800 sn-glycerol-3-phosphate import ATP-binding protein UgpC no 0.44
    3 CSW01_11085 hypothetical protein no 0.44
    4 CSW01_17270 isoprenoid biosynthesis protein ElbB no 0.44
    5 CSW01_04870 ribosome silencing factor no 0.43
    6 CSW01_03880 HTH-type transcriptional regulator IscR 0.78 0.43
    7 CSW01_08005 UDP-glucose--hexose-1-phosphate uridylyltransferase no 0.42
    8 CSW01_12970 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase 0.27 0.42
    9 CSW01_13670 DNA-directed RNA polymerase subunit omega no 0.41
    10 CSW01_07040 methyl-accepting chemotaxis protein no 0.41
    11 CSW01_06365 AraC family transcriptional regulator no 0.41
    12 CSW01_16395 type II toxin-antitoxin system RelE/ParE family toxin no 0.40
    13 CSW01_08010 MFS transporter 0.39 0.39
    14 CSW01_03235 N-acetylglucosamine kinase no 0.39
    15 CSW01_00425 universal stress protein B no 0.39
    16 CSW01_08555 intracellular septation protein A 0.32 0.39
    17 CSW01_05800 ATP-dependent Clp protease adaptor ClpS 0.52 0.38
    18 CSW01_08365 ABC transporter permease no 0.38
    19 CSW01_07090 type VI secretion system tube protein Hcp no 0.38
    20 CSW01_08740 acyl-CoA dehydrogenase no 0.38

    Or look for negative cofitness