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  • Top cofit genes for CSW01_00190 from Vibrio cholerae E7946 ATCC 55056

    DUF1040 domain-containing protein
    SEED: Protein yihD
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12200 ribosomal RNA small subunit methyltransferase H no 0.68
    2 CSW01_17275 large conductance mechanosensitive channel protein MscL 0.60 0.66
    3 CSW01_09075 hypothetical protein no 0.65
    4 CSW01_18010 cytochrome C554 0.19 0.61
    5 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase 0.50 0.61
    6 CSW01_17650 beta-ketoacyl-ACP reductase no 0.60
    7 CSW01_05210 GTP 3',8-cyclase MoaA no 0.58
    8 CSW01_18685 heme utilization cystosolic carrier protein HutX no 0.58
    9 CSW01_18665 permease 0.56 0.57
    10 CSW01_03670 biofilm architecture maintenance protein MbaA no 0.56
    11 CSW01_16990 hypothetical protein no 0.56
    12 CSW01_18905 GGDEF domain-containing protein no 0.55
    13 CSW01_06825 acylphosphatase no 0.55
    14 CSW01_03160 DNA/RNA nuclease SfsA 0.63 0.55
    15 CSW01_12425 hypothetical protein no 0.54
    16 CSW01_08670 TVP38/TMEM64 family protein no 0.54
    17 CSW01_04495 hypothetical protein no 0.54
    18 CSW01_02150 MSHA biogenesis protein MshB no 0.53
    19 CSW01_18120 DUF2238 domain-containing protein no 0.52
    20 CSW01_18560 hypothetical protein no 0.52

    Or look for negative cofitness