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  • Top cofit genes for CSW01_00175 from Vibrio cholerae E7946 ATCC 55056

    serine/threonine protein kinase
    SEED: YihE protein, a ser/thr kinase implicated in LPS synthesis and Cpx signalling

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09860 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 0.76 0.68
    2 CSW01_00040 amino acid ABC transporter ATP-binding protein no 0.67
    3 CSW01_13825 D-aminoacyl-tRNA deacylase 0.49 0.67
    4 CSW01_10770 methyl-accepting chemotaxis protein no 0.67
    5 CSW01_11165 integrase no 0.66
    6 CSW01_00215 potassium uptake protein TrkH 0.19 0.66
    7 CSW01_08445 ABC transporter substrate-binding protein 0.39 0.64
    8 CSW01_14820 hypothetical protein no 0.63
    9 CSW01_07585 formate dehydrogenase subunit gamma 0.37 0.63
    10 CSW01_06075 DUF3581 domain-containing protein no 0.63
    11 CSW01_11710 transcriptional regulator no 0.63
    12 CSW01_03105 hypoxanthine phosphoribosyltransferase 0.32 0.62
    13 CSW01_13325 pilus assembly protein PilN 0.42 0.62
    14 CSW01_04085 response regulator no 0.62
    15 CSW01_11825 zinc transporter ZntB 0.18 0.62
    16 CSW01_15345 XRE family transcriptional regulator no 0.62
    17 CSW01_18295 acetoacetate--CoA ligase no 0.62
    18 CSW01_14465 EamA/RhaT family transporter 0.47 0.62
    19 CSW01_02835 RNA polymerase sigma factor RpoS no 0.61
    20 CSW01_19490 GGDEF domain-containing protein no 0.61

    Or look for negative cofitness