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  • Top cofit genes for CSW01_00135 from Vibrio cholerae E7946 ATCC 55056

    threonine ammonia-lyase, biosynthetic
    SEED: Threonine dehydratase biosynthetic (EC 4.3.1.19)
    KEGG: threonine dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09035 IclR family transcriptional regulator no 0.72
    2 CSW01_09455 hemolysin no 0.70
    3 CSW01_00795 alkaline serine protease no 0.70
    4 CSW01_02230 ribonuclease E inhibitor RraB 0.44 0.68
    5 CSW01_16890 sensor histidine kinase KdpD no 0.67
    6 CSW01_10590 flagellar biosynthetic protein FliQ no 0.67
    7 CSW01_17345 prepilin peptidase no 0.66
    8 CSW01_01860 SlyX protein no 0.65
    9 CSW01_12080 recombinase RecF no 0.65
    10 CSW01_14985 DUF3696 domain-containing protein no 0.65
    11 CSW01_00290 gamma carbonic anhydrase family protein no 0.65
    12 CSW01_16855 CAI-1 autoinducer synthase no 0.65
    13 CSW01_08700 DUF2498 domain-containing protein no 0.65
    14 CSW01_00470 twin-arginine translocase subunit TatC 0.39 0.64
    15 CSW01_17885 hypothetical protein 0.55 0.64
    16 CSW01_18905 GGDEF domain-containing protein no 0.64
    17 CSW01_13195 glutathione-regulated potassium-efflux system protein KefB no 0.64
    18 CSW01_15205 HTH-type transcriptional regulator UlaR no 0.64
    19 CSW01_12910 peptide-methionine (S)-S-oxide reductase no 0.64
    20 CSW01_10020 ROK family protein no 0.64

    Or look for negative cofitness