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  • Top cofit genes for CSW01_00090 from Vibrio cholerae E7946 ATCC 55056

    valine--pyruvate transaminase
    SEED: Valine--pyruvate aminotransferase (EC 2.6.1.66)
    KEGG: valine--pyruvate aminotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09845 o-succinylbenzoate synthase 0.34 0.59
    2 CSW01_10975 phage tail protein no 0.49
    3 CSW01_14940 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase no 0.49
    4 CSW01_10220 DNA topoisomerase III no 0.48
    5 CSW01_07575 NAD-dependent protein deacylase no 0.48
    6 CSW01_11230 chemotaxis protein methyltransferase 1 no 0.47
    7 CSW01_07815 YhcH/YjgK/YiaL family protein no 0.47
    8 CSW01_13610 membrane protein FxsA no 0.46
    9 CSW01_10950 hypothetical protein no 0.45
    10 CSW01_03425 MATE family efflux transporter no 0.45
    11 CSW01_17430 NADH oxidase no 0.45
    12 CSW01_16885 pyruvate:ferredoxin (flavodoxin) oxidoreductase 0.35 0.45
    13 CSW01_14440 redox-sensitive transcriptional activator SoxR no 0.44
    14 CSW01_00240 LysM peptidoglycan-binding domain-containing protein no 0.44
    15 CSW01_00375 Bcr/CflA family drug resistance efflux transporter no 0.43
    16 CSW01_10990 phage tail tape measure protein no 0.43
    17 CSW01_11055 phage major capsid protein, P2 family no 0.43
    18 CSW01_12040 DUF1499 domain-containing protein no 0.43
    19 CSW01_04765 hypothetical protein no 0.43
    20 CSW01_13615 GGDEF domain-containing protein no 0.43

    Or look for negative cofitness