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  • Top cofit genes for CSW01_00065 from Vibrio cholerae E7946 ATCC 55056

    DNA replication and repair protein RecF
    SEED: DNA recombination and repair protein RecF
    KEGG: DNA replication and repair protein RecF

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_10620 flagellar hook-length control protein FliK no 0.70
    2 CSW01_02140 type II secretion system F family protein no 0.69
    3 CSW01_13635 thiol:disulfide interchange protein DsbD no 0.69
    4 CSW01_01125 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.84 0.68
    5 CSW01_02160 MSHA pilin protein MshC no 0.67
    6 CSW01_02135 MSHA biogenesis protein MshE no 0.67
    7 CSW01_10345 flagellar biosynthesis protein FlhF 0.31 0.66
    8 CSW01_00470 twin-arginine translocase subunit TatC 0.74 0.66
    9 CSW01_02170 type II secretion system protein no 0.66
    10 CSW01_02825 protein-L-isoaspartate O-methyltransferase 0.65 0.66
    11 CSW01_02155 MSHA pilin protein MshA no 0.66
    12 CSW01_18145 resolvase no 0.66
    13 CSW01_02120 pilus (MSHA type) biogenesis protein MshL no 0.65
    14 CSW01_05070 N-acetylglucosamine-6-phosphate deacetylase 0.75 0.65
    15 CSW01_17675 GGDEF domain-containing protein no 0.64
    16 CSW01_10645 flagellar motor switch protein FliG 0.40 0.64
    17 CSW01_11180 flagellar hook-associated protein FlgK 0.46 0.64
    18 CSW01_00170 thiol:disulfide interchange protein DsbA 0.61 0.64
    19 CSW01_07240 histidine kinase no 0.64
    20 CSW01_12845 metalloprotease PmbA 0.49 0.64

    Or look for negative cofitness