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  • Top cofit genes for BPHYT_RS35385 from Burkholderia phytofirmans PsJN

    GntR family transcriptional regulator
    SEED: Putative alkanesulfonate metabolism utilization regulator
    KEGG: GntR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 BPHYT_RS16075 D-arabinitol 4-dehydrogenase 0.28 0.29
    2 BPHYT_RS16085 DeoR faimly transcriptional regulator 0.36 0.28
    3 BPHYT_RS00915 IclR family transcriptional regulator no 0.28
    4 BPHYT_RS11190 PrkA family serine protein kinase 0.46 0.28
    5 BPHYT_RS14320 UvrABC system protein C 0.69 0.28
    6 BPHYT_RS13595 IclR family transcriptional regulator no 0.27
    7 BPHYT_RS05285 hypothetical protein no 0.26
    8 BPHYT_RS33535 RNA polymerase sigma factor RpoD no 0.26
    9 BPHYT_RS30160 AraC family transcriptional regulator no 0.26
    10 BPHYT_RS35185 DOPA 4,5-dioxygenase no 0.25
    11 BPHYT_RS14995 formate dehydrogenase subunit alpha 0.37 0.24
    12 BPHYT_RS21675 FAD-dependent oxidoreductase no 0.24
    13 BPHYT_RS13350 shikimate kinase no 0.23
    14 BPHYT_RS14490 molybdenum cofactor biosynthesis protein MoeA 0.57 0.23
    15 BPHYT_RS33540 hypothetical protein no 0.23
    16 BPHYT_RS05120 hypothetical protein no 0.23
    17 BPHYT_RS06905 excinuclease ABC subunit B 0.67 0.23
    18 BPHYT_RS18505 amino acid dehydrogenase no 0.22
    19 BPHYT_RS28000 permease no 0.22
    20 BPHYT_RS08245 anti-sigma factor no 0.22

    Or look for negative cofitness