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  • Top cofit genes for BPHYT_RS34705 from Burkholderia phytofirmans PsJN

    ABC transporter substrate-binding protein
    SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 BPHYT_RS26290 photosystem reaction center subunit H no 0.31
    2 BPHYT_RS27200 pyridoxal 4-dehydrogenase no 0.30
    3 BPHYT_RS27790 poly-beta-hydroxybutyrate polymerase no 0.30
    4 BPHYT_RS08895 glycoside hydrolase no 0.30
    5 BPHYT_RS14640 FecR protein no 0.30
    6 BPHYT_RS16855 16S rRNA methyltransferase no 0.29
    7 BPHYT_RS06100 glucoamylase no 0.29
    8 BPHYT_RS12205 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.34 0.29
    9 BPHYT_RS18745 coniferyl aldehyde dehydrogenase 0.30 0.29
    10 BPHYT_RS23020 alcohol dehydrogenase no 0.29
    11 BPHYT_RS29040 diguanylate cyclase no 0.29
    12 BPHYT_RS18735 GMC family oxidoreductase 0.32 0.28
    13 BPHYT_RS35670 bicyclomycin resistance protein no 0.28
    14 BPHYT_RS06050 membrane protein no 0.28
    15 BPHYT_RS20370 MFS transporter no 0.27
    16 BPHYT_RS00480 excinuclease ABC subunit A no 0.27
    17 BPHYT_RS09240 ABC transporter permease no 0.26
    18 BPHYT_RS03250 diguanylate cyclase no 0.26
    19 BPHYT_RS21020 branched-chain amino acid ABC transporter substrate-binding protein no 0.26
    20 BPHYT_RS35250 alcohol dehydrogenase no 0.26

    Or look for negative cofitness