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Cofit
Protein
Homologs
Top cofit genes for BPHYT_RS33475 from
Burkholderia phytofirmans PsJN
threonine transporter
SEED: L-lysine permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
BPHYT
_RS35560
endoribonuclease L-PSP
no
0.30
2
BPHYT
_RS36410
integrase family protein
no
0.28
3
BPHYT
_RS03475
catalase
0.32
0.28
4
BPHYT
_RS13510
C4-dicarboxylate transporter
no
0.27
5
BPHYT
_RS17560
nitroreductase
no
0.27
6
BPHYT
_RS02865
hypothetical protein
no
0.27
7
BPHYT
_RS25855
hypothetical protein
no
0.26
8
BPHYT
_RS03990
sugar ABC transporter substrate-binding protein
no
0.26
9
BPHYT
_RS06735
glutathione S-transferase
no
0.26
10
BPHYT
_RS12255
hypothetical protein
no
0.25
11
BPHYT
_RS17530
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
no
0.25
12
BPHYT
_RS17035
sugar kinase
0.57
0.25
13
BPHYT
_RS12290
universal stress protein UspA
no
0.25
14
BPHYT
_RS05610
DNA-cytosine methyltransferase
no
0.24
15
BPHYT
_RS33390
phosphate ABC transporter substrate-binding protein
no
0.24
16
BPHYT
_RS06700
ADP-ribose pyrophosphatase
0.39
0.24
17
BPHYT
_RS14855
ADP-L-glycero-D-manno-heptose-6-epimerase
no
0.24
18
BPHYT
_RS23955
LysR family transcriptional regulator
0.43
0.24
19
BPHYT
_RS24160
D-galactarate dehydratase
no
0.23
20
BPHYT
_RS30830
MFS transporter
no
0.23
Or look for
negative cofitness