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Cofit
Protein
Homologs
Top cofit genes for BPHYT_RS30935 from
Burkholderia phytofirmans PsJN
MFS transporter
SEED: D-galactonate transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
BPHYT
_RS31295
LuxR family transcriptional regulator
no
0.30
2
BPHYT
_RS24770
DeoR family transcriptional regulator
no
0.30
3
BPHYT
_RS08890
3-oxoacyl-ACP reductase
no
0.29
4
BPHYT
_RS19670
DSBA oxidoreductase
no
0.28
5
BPHYT
_RS24800
peptidase M23B
no
0.27
6
BPHYT
_RS34665
hypothetical protein
no
0.26
7
BPHYT
_RS17535
extradiol ring-cleavage dioxygenase class III protein subunit B
no
0.26
8
BPHYT
_RS32615
hypothetical protein
no
0.26
9
BPHYT
_RS31120
pseudouridine-5'-phosphate glycosidase
no
0.25
10
BPHYT
_RS12935
chemotaxis protein CheY
no
0.25
11
BPHYT
_RS04640
branched-chain amino acid ABC transporter substrate-binding protein
0.15
0.24
12
BPHYT
_RS17665
membrane protein
no
0.24
13
BPHYT
_RS12940
signal transduction histidine kinase
no
0.24
14
BPHYT
_RS22015
spermidine/putrescine ABC transporter ATPase
no
0.24
15
BPHYT
_RS23230
histidine kinase
no
0.23
16
BPHYT
_RS00730
porin
no
0.23
17
BPHYT
_RS17560
nitroreductase
no
0.23
18
BPHYT
_RS02740
N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF)
(from data)
no
0.22
19
BPHYT
_RS27075
membrane protein
no
0.22
20
BPHYT
_RS27680
arginine deiminase
no
0.22
Or look for
negative cofitness