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Cofit
Protein
Homologs
Top cofit genes for BPHYT_RS28915 from
Burkholderia phytofirmans PsJN
diguanylate cyclase
SEED: FOG: GGDEF domain
Rank
Hit
Name
Description
Conserved?
Cofitness
1
BPHYT
_RS09655
mechanosensitive ion channel protein MscS
no
0.37
2
BPHYT
_RS14840
lytic transglycosylase
no
0.36
3
BPHYT
_RS24675
spermidine/putrescine ABC transporter substrate-binding protein
no
0.36
4
BPHYT
_RS14640
FecR protein
no
0.36
5
BPHYT
_RS34760
sensor histidine kinase
no
0.36
6
BPHYT
_RS02935
potassium transporter
no
0.36
7
BPHYT
_RS31135
hexuranate MFS transporter
no
0.36
8
BPHYT
_RS32620
hypothetical protein
no
0.35
9
BPHYT
_RS16550
calcium transporter ChaC
no
0.34
10
BPHYT
_RS04880
cobalamin-binding protein
0.30
0.34
11
BPHYT
_RS13265
hypothetical protein
no
0.34
12
BPHYT
_RS21685
cobalamin biosynthesis protein CobS
no
0.34
13
BPHYT
_RS27995
hypothetical protein
no
0.33
14
BPHYT
_RS32395
hypothetical protein
no
0.33
15
BPHYT
_RS05550
hypothetical protein
no
0.33
16
BPHYT
_RS07475
nitrate reductase
no
0.33
17
BPHYT
_RS01975
hypothetical protein
no
0.33
18
BPHYT
_RS21255
spermidine/putrescine ABC transporter ATP-binding protein
no
0.32
19
BPHYT
_RS14205
lytic transglycosylase
no
0.32
20
BPHYT
_RS25010
N5,N10-methylene tetrahydromethanopterin reductase
no
0.32
Or look for
negative cofitness