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  • Top cofit genes for BPHYT_RS22510 from Burkholderia phytofirmans PsJN

    MexE family multidrug efflux RND transporter periplasmic adaptor subunit
    SEED: RND efflux system, membrane fusion protein CmeA

    Rank Hit Name Description Conserved? Cofitness  
    1 BPHYT_RS22515 multidrug efflux RND transporter permease subunit 0.98 0.50
    2 BPHYT_RS22520 RND transporter 0.85 0.35
    3 BPHYT_RS16895 competence damage-inducible protein A 0.30 0.28
    4 BPHYT_RS22500 transcriptional regulator 0.92 0.24
    5 BPHYT_RS24765 FAD-dependent oxidoreductase no 0.24
    6 BPHYT_RS13690 short-chain dehydrogenase no 0.24
    7 BPHYT_RS02795 glycosyl transferase no 0.24
    8 BPHYT_RS11345 AraC family transcriptional regulator 0.16 0.23
    9 BPHYT_RS11220 LacI family transcriptional regulator no 0.23
    10 BPHYT_RS08280 acyl dehydratase no 0.23
    11 BPHYT_RS33665 deoxyribodipyrimidine photo-lyase 0.44 0.22
    12 BPHYT_RS36295 hypothetical protein no 0.22
    13 BPHYT_RS36145 hypothetical protein no 0.22
    14 BPHYT_RS13320 allantoate amidohydrolase no 0.22
    15 BPHYT_RS31840 anhydrase no 0.22
    16 BPHYT_RS04815 dihydroxy-acid dehydratase no 0.21
    17 BPHYT_RS18355 membrane protein no 0.21
    18 BPHYT_RS14060 peptidase M23 no 0.21
    19 BPHYT_RS24410 type VI secretion protein no 0.20
    20 BPHYT_RS14640 FecR protein no 0.20

    Or look for negative cofitness