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  • Top cofit genes for BPHYT_RS22380 from Burkholderia phytofirmans PsJN

    Carnitine 3-dehydrogenase (EC 1.1.1.108) (from data)
    Original annotation: 3-hydroxybutyryl-CoA dehydrogenase
    SEED: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
    KEGG: 3-hydroxybutyryl-CoA dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 BPHYT_RS22375 4-hydroxybenzoyl-CoA thioesterase 0.91 0.53
    2 BPHYT_RS22385 hypothetical protein 0.88 0.47
    3 BPHYT_RS25115 sarcosine oxidase subunit alpha 0.94 0.42
    4 BPHYT_RS22390 glycine/betaine ABC transporter substrate-binding protein 0.67 0.39
    5 BPHYT_RS22395 AraC family transcriptional regulator 0.80 0.36
    6 BPHYT_RS25105 sarcosine oxidase subunit beta 0.91 0.35
    7 BPHYT_RS25220 ferredoxin oxidoreductase 0.86 0.32
    8 BPHYT_RS25205 electron transfer flavoprotein subunit alpha 0.77 0.31
    9 BPHYT_RS10760 major facilitator transporter no 0.26
    10 BPHYT_RS36315 CagE TrbE VirB component of type IV transporter system no 0.26
    11 BPHYT_RS02315 hypothetical protein no 0.24
    12 BPHYT_RS06480 ABC transporter permease no 0.24
    13 BPHYT_RS17695 membrane protein no 0.24
    14 BPHYT_RS27790 poly-beta-hydroxybutyrate polymerase no 0.24
    15 BPHYT_RS02085 methylmalonyl-CoA mutase no 0.24
    16 BPHYT_RS09075 CoA transferase 0.30 0.23
    17 BPHYT_RS36175 hypothetical protein no 0.23
    18 BPHYT_RS19040 aquaporin Z no 0.23
    19 BPHYT_RS23305 hypothetical protein no 0.22
    20 BPHYT_RS29040 diguanylate cyclase no 0.22

    Or look for negative cofitness