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  • Top cofit genes for BPHYT_RS20690 from Burkholderia phytofirmans PsJN

    ABC transporter permease
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: ribose transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 BPHYT_RS07130 biopolymer transporter ExbD no 0.25
    2 BPHYT_RS35430 DSBA oxidoreductase no 0.23
    3 BPHYT_RS07065 3-ketoacyl-ACP reductase no 0.22
    4 BPHYT_RS29370 Fis family transcriptional regulator 0.32 0.21
    5 BPHYT_RS00730 porin no 0.21
    6 BPHYT_RS31185 LysR family transcriptional regulator no 0.21
    7 BPHYT_RS24660 ABC transporter ATP-binding protein no 0.20
    8 BPHYT_RS33560 membrane protein no 0.20
    9 BPHYT_RS25855 hypothetical protein no 0.20
    10 BPHYT_RS17150 type II secretion system protein no 0.20
    11 BPHYT_RS34560 hypothetical protein no 0.20
    12 BPHYT_RS05385 short-chain dehydrogenase no 0.20
    13 BPHYT_RS13050 membrane protein no 0.19
    14 BPHYT_RS33300 ABC transporter no 0.19
    15 BPHYT_RS00520 glutamate--cysteine ligase no 0.19
    16 BPHYT_RS26620 MFS transporter no 0.19
    17 BPHYT_RS21190 phospholipase C no 0.19
    18 BPHYT_RS16625 hypothetical protein no 0.18
    19 BPHYT_RS27805 RNA-metabolising metallo-beta-lactamase no 0.18
    20 BPHYT_RS21840 hypothetical protein no 0.18

    Or look for negative cofitness