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  • Top cofit genes for BPHYT_RS19705 from Burkholderia phytofirmans PsJN

    LysR family transcriptional regulator
    SEED: Galactose-binding protein regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 BPHYT_RS19730 L-arabonate dehydratase (EC 4.2.1.25) (from data) 0.81 0.47
    2 BPHYT_RS19720 arabinose ABC transporter ATP-binding protein 0.20 0.45
    3 BPHYT_RS16915 L-arabinono-1,4-lactonase; galactonolactonase (from data) 0.42 0.34
    4 BPHYT_RS22720 LysR family transcriptional regulator 0.35 0.33
    5 BPHYT_RS16920 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) 0.88 0.32
    6 BPHYT_RS22715 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) (from data) 0.85 0.29
    7 BPHYT_RS19725 arabinose ABC transporter permease no 0.29
    8 BPHYT_RS19710 aldehyde dehydrogenase no 0.28
    9 BPHYT_RS16935 D-galactose ABC transporter, substrate-binding component (from data) no 0.28
    10 BPHYT_RS07040 asparaginase no 0.25
    11 BPHYT_RS19715 ATPase 0.21 0.25
    12 BPHYT_RS17430 thiol:disulfide interchange protein no 0.25
    13 BPHYT_RS34585 hypothetical protein no 0.24
    14 BPHYT_RS03895 hypothetical protein no 0.23
    15 BPHYT_RS18420 hypothetical protein no 0.22
    16 BPHYT_RS16930 D-galactose ABC transporter, ATPase component (from data) no 0.22
    17 BPHYT_RS34755 hypothetical protein no 0.22
    18 BPHYT_RS22840 motility protein B no 0.22
    19 BPHYT_RS36295 hypothetical protein no 0.21
    20 BPHYT_RS23040 peptidase no 0.21

    Or look for negative cofitness