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  • Top cofit genes for BPHYT_RS13770 from Burkholderia phytofirmans PsJN

    RND transporter
    SEED: RND efflux system, outer membrane lipoprotein, NodT family

    Rank Hit Name Description Conserved? Cofitness  
    1 BPHYT_RS23985 carbohydrate porin no 0.83
    2 BPHYT_RS13775 fusaric acid resistance protein 0.88 0.83
    3 BPHYT_RS13785 membrane protein 0.88 0.82
    4 BPHYT_RS16210 peptidase no 0.45
    5 BPHYT_RS24910 NADH:ubiquinone oxidoreductase subunit M no 0.43
    6 BPHYT_RS34805 ABC transporter no 0.42
    7 BPHYT_RS24905 hypothetical protein no 0.40
    8 BPHYT_RS05185 chloride channel protein no 0.38
    9 BPHYT_RS21350 ADP-glucose pyrophosphorylase no 0.37
    10 BPHYT_RS29750 phosphoenolpyruvate phosphomutase no 0.34
    11 BPHYT_RS34825 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.31 0.33
    12 BPHYT_RS13070 oxidoreductase molybdopterin subunit 0.29 0.33
    13 BPHYT_RS34810 RND transporter no 0.33
    14 BPHYT_RS14050 UDP pyrophosphate phosphatase no 0.32
    15 BPHYT_RS29740 2-aminoethylphosphonate aminotransferase no 0.32
    16 BPHYT_RS17745 toluene tolerance family protein no 0.32
    17 BPHYT_RS17760 ABC transporter permease 0.41 0.30
    18 BPHYT_RS34815 ABC transporter no 0.30
    19 BPHYT_RS23815 LysR family transcriptional regulator 0.34 0.29
    20 BPHYT_RS11390 penicillin-binding protein 1A no 0.29

    Or look for negative cofitness