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  • Top cofit genes for BPHYT_RS09980 from Burkholderia phytofirmans PsJN

    TetR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 BPHYT_RS23205 alkylhydroperoxidase no 0.29
    2 BPHYT_RS16820 allantoicase no 0.27
    3 BPHYT_RS10750 LysR family transcriptional regulator no 0.27
    4 BPHYT_RS29255 aspartate carbamoyltransferase no 0.26
    5 BPHYT_RS20570 heptosyltransferase no 0.26
    6 BPHYT_RS24655 amino acid ABC transporter substrate-binding protein 0.14 0.25
    7 BPHYT_RS34395 multidrug transporter MatE no 0.24
    8 BPHYT_RS26115 polysaccharide deacetylase no 0.24
    9 BPHYT_RS27000 aspartate aminotransferase no 0.23
    10 BPHYT_RS29995 acyltransferase no 0.23
    11 BPHYT_RS28170 nitrate ABC transporter substrate-binding protein no 0.23
    12 BPHYT_RS13140 MFS transporter no 0.23
    13 BPHYT_RS30460 glycerate dehydrogenase no 0.23
    14 BPHYT_RS04435 ABC transporter no 0.22
    15 BPHYT_RS21210 hypothetical protein 0.45 0.22
    16 BPHYT_RS28915 diguanylate cyclase no 0.22
    17 BPHYT_RS26815 1-aminocyclopropane-1-carboxylate deaminase no 0.22
    18 BPHYT_RS23975 peroxidase no 0.21
    19 BPHYT_RS21135 NADH-ubiquinone oxidoreductase subunit 6 no 0.21
    20 BPHYT_RS08235 nucleoprotein, Hfg, host factor I no 0.21

    Or look for negative cofitness