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Cofit
Protein
Homologs
Top cofit genes for BBR_RS14000 from
Bifidobacterium breve UCC2003
hypothetical protein
SEED: TPR-repeat-containing protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
BBR
_RS18010
zinc metalloprotease
no
0.50
2
BBR
_RS21170
membrane protein insertion efficiency factor YidD
no
0.47
3
BBR
_RS16650
ABC transporter substrate-binding protein
no
0.47
4
BBR
_RS20180
carbohydrate ABC transporter permease
no
0.47
5
BBR
_RS20185
sugar ABC transporter permease
no
0.46
6
BBR
_RS16300
pyridoxamine 5'-phosphate oxidase family protein
no
0.46
7
BBR
_RS15055
hypothetical protein
no
0.46
8
BBR
_RS12045
hypothetical protein
no
0.45
9
BBR
_RS19655
hypothetical protein
no
0.45
10
BBR
_RS11135
dihydrodipicolinate synthase family protein
no
0.45
11
BBR
_RS20195
ROK family transcriptional regulator
no
0.45
12
BBR
_RS12305
endonuclease/exonuclease/phosphatase family protein
no
0.45
13
BBR
_RS20190
Raffinose-binding protein
no
0.45
14
BBR
_RS19200
hypothetical protein
no
0.44
15
BBR
_RS10580
septation inhibitor protein
no
0.44
16
BBR
_RS19530
septum formation protein Maf
no
0.44
17
BBR
_RS12880
Crp/Fnr family transcriptional regulator
no
0.44
18
BBR
_RS16810
aldose 1-epimerase
no
0.44
19
BBR
_RS19465
ribonuclease E/G
no
0.44
20
BBR
_RS15150
16S rRNA (uracil(1498)-N(3))-methyltransferase
no
0.44
Or look for
negative cofitness