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Cofit
Protein
Homologs
Top cofit genes for Ac3H11_4195 from
Acidovorax sp. GW101-3H11
RecA/RadA recombinase
SEED: RecA/RadA recombinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Ac3H11
_4193
DNA polymerase III alpha subunit (EC 2.7.7.7)
no
0.70
2
Ac3H11
_3276
hypothetical protein
no
0.60
3
Ac3H11
_4646
Chaperone protein HtpG
no
0.56
4
Ac3H11
_3277
LysR family transcriptional regulator PA2758
no
0.56
5
Ac3H11
_3026
Excinuclease ABC subunit A, dimeric form
no
0.54
6
Ac3H11
_3112
tRNA pseudouridine synthase C (EC 4.2.1.70)
no
0.52
7
Ac3H11
_1564
DNA recombination and repair protein RecO
no
0.49
8
Ac3H11
_3308
ATP-dependent DNA helicase RecQ
no
0.48
9
Ac3H11
_747
RNA polymerase signa E (sigma 24)
no
0.48
10
Ac3H11
_4387
Excinuclease ABC subunit A
0.31
0.47
11
Ac3H11
_473
Recombination protein RecR
no
0.46
12
Ac3H11
_507
Thymidine phosphorylase (EC 2.4.2.4)
no
0.45
13
Ac3H11
_4921
mRNA 3-end processing factor
0.33
0.45
14
Ac3H11
_5003
putative transmembrane protein
no
0.45
15
Ac3H11
_594
FIG00348977: hypothetical protein
no
0.44
16
Ac3H11
_4624
Tricarboxylate transport protein TctC
no
0.44
17
Ac3H11
_2876
hypothetical protein
no
0.43
18
Ac3H11
_4194
DNA polymerase-like protein PA0670
no
0.41
19
Ac3H11
_3185
Extracellular ligand-binding receptor
no
0.41
20
Ac3H11
_3810
Transcriptional regulator, TetR family
no
0.41
Or look for
negative cofitness