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Cofit
Protein
Homologs
Top cofit genes for AO356_27770 from
Pseudomonas fluorescens FW300-N2C3
hypothetical protein
SEED: Cold-shock DNA-binding domain
Rank
Hit
Name
Description
Conserved?
Cofitness
1
AO356
_14135
biotin synthase
no
0.35
2
AO356
_25560
2-keto-3-deoxy-L-rhamnonate aldolase
no
0.34
3
AO356
_05235
glycerol-3-phosphate ABC transporter substrate-binding protein
no
0.34
4
AO356
_10075
3'(2'),5'-bisphosphate nucleotidase CysQ
no
0.33
5
AO356
_10910
tryptophan synthase subunit alpha
no
0.32
6
AO356
_10915
tryptophan synthase subunit beta
no
0.31
7
AO356
_28110
ATPase
no
0.31
8
AO356
_14140
8-amino-7-oxononanoate synthase
no
0.31
9
AO356
_14145
transporter
no
0.31
10
AO356
_28025
aldehyde dehydrogenase
no
0.30
11
AO356
_21465
amidophosphoribosyltransferase
no
0.30
12
AO356
_14435
anthranilate phosphoribosyltransferase
no
0.30
13
AO356
_14150
malonyl-[acyl-carrier protein] O-methyltransferase BioC
no
0.30
14
AO356
_16075
Fis family transcriptional regulator
0.65
0.29
15
AO356
_04870
TetR family transcriptional regulator
no
0.29
16
AO356
_00560
required for sulfate utilization, putative electron transport protein for sulfite reductase
(from data)
no
0.29
17
AO356
_21440
N-(5'-phosphoribosyl)anthranilate isomerase
no
0.29
18
AO356
_14420
anthranilate synthase
no
0.29
19
AO356
_17025
alpha/beta hydrolase
0.20
0.28
20
AO356
_18595
TetR family transcriptional regulator
0.76
0.28
Or look for
negative cofitness