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Cofit
Protein
Homologs
Top cofit genes for AO353_25705 from
Pseudomonas fluorescens FW300-N2E3
AraC family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
AO353
_26635
branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4)
(from data)
0.58
0.66
2
AO353
_26650
dihydrolipoamide dehydrogenase
0.72
0.65
3
AO353
_26640
2-oxoisovalerate dehydrogenase
0.58
0.63
4
AO353
_25695
AMP-binding protein
0.91
0.61
5
AO353
_26630
ArsR family transcriptional regulator
0.61
0.57
6
AO353
_00900
2-methylisocitrate lyase
0.68
0.56
7
AO353
_26645
branched-chain alpha-keto acid dehydrogenase subunit E2
0.58
0.55
8
AO353
_25680
2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5)
(from data)
0.92
0.55
9
AO353
_26655
branched-chain amino acid aminotransferase
0.52
0.51
10
AO353
_00885
3-methylitaconate isomerase
0.47
0.50
11
AO353
_17105
ABC transporter ATP-binding protein
no
0.50
12
AO353
_00890
Fe/S-dependent 2-methylisocitrate dehydratase AcnD
0.47
0.50
13
AO353
_05995
LysR family transcriptional regulator
0.14
0.47
14
AO353
_25685
acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16)
(from data)
0.91
0.46
15
AO353
_05990
Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
(from data)
0.67
0.46
16
AO353
_05985
3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
(from data)
0.73
0.45
17
AO353
_11125
5S ribosomal RNA
no
0.44
18
AO353
_07205
lipoate--protein ligase
0.28
0.43
19
AO353
_17920
histidine kinase
no
0.41
20
AO353
_03635
mechanosensitive ion channel protein MscS
0.62
0.41
Or look for
negative cofitness