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Cofit
Protein
Homologs
Top cofit genes for AO353_23910 from
Pseudomonas fluorescens FW300-N2E3
response regulator
SEED: Response regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
AO353
_02545
MFS transporter
no
0.36
2
AO353
_14890
amino acid ABC transporter
no
0.34
3
AO353
_23190
LacI family transcriptional regulator
no
0.33
4
AO353
_10545
ferredoxin
no
0.31
5
AO353
_11455
hypothetical protein
no
0.31
6
AO353
_07475
sulfurase
no
0.31
7
AO353
_27360
portal protein
no
0.31
8
AO353
_11965
hypothetical protein
no
0.31
9
AO353
_21545
type VI secretion effector protein (Hcp)
no
0.30
10
AO353
_17625
RNA polymerase subunit sigma
0.51
0.30
11
AO353
_11530
diguanylate cyclase
no
0.30
12
AO353
_07470
acetylornithine aminotransferase
no
0.30
13
AO353
_01175
hypothetical protein
no
0.30
14
AO353
_10275
glycosyl transferase family 1
no
0.29
15
AO353
_07480
LysR family transcriptional regulator
no
0.29
16
AO353
_29105
hypothetical protein
no
0.29
17
AO353
_04945
MerR family transcriptional regulator
no
0.29
18
AO353
_18320
hypothetical protein
no
0.28
19
AO353
_16495
zinc metallopeptidase RseP
0.42
0.28
20
AO353
_26925
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
(from data)
no
0.28
Or look for
negative cofitness