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Cofit
Protein
Homologs
Top cofit genes for AO353_19040 from
Pseudomonas fluorescens FW300-N2E3
thioredoxin
SEED: Possible periplasmic thiredoxin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
AO353
_19035
pilus assembly protein PilZ
0.93
0.71
2
AO353
_16615
RNA polymerase sigma factor RpoS
0.73
0.70
3
AO353
_01070
poly(R)-hydroxyalkanoic acid synthase
no
0.54
4
AO353
_08965
transcriptional regulator
0.61
0.53
5
AO353
_19045
2-dehydropantoate 2-reductase
0.92
0.53
6
AO353
_01065
acetyl-CoA acetyltransferase
no
0.51
7
AO353
_19025
acetyltransferase
0.75
0.50
8
AO353
_01055
AraC family transcriptional regulator
no
0.49
9
AO353
_01060
3-ketoacyl-ACP reductase
no
0.49
10
AO353
_01045
phasin
no
0.47
11
AO353
_18995
ABC transporter permease
0.47
0.46
12
AO353
_27890
RpiR family transcriptional regulator
no
0.46
13
AO353
_19340
amino acid ABC transporter substrate-binding protein
0.38
0.45
14
AO353
_28150
arginine aminotransferase
no
0.44
15
AO353
_11155
thioesterase
no
0.42
16
AO353
_11385
poly-beta-1,6 N-acetyl-D-glucosamine synthase
no
0.42
17
AO353
_02735
chemotaxis protein CheY
0.42
0.41
18
AO353
_24495
malate permease
no
0.41
19
AO353
_23775
glycogen synthase
no
0.41
20
AO353
_20925
hypothetical protein
no
0.41
Or look for
negative cofitness