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  • Top cofit genes for AO353_14220 from Pseudomonas fluorescens FW300-N2E3

    ribosomal large subunit pseudouridine synthase D
    SEED: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase D

    Rank Hit Name Description Conserved? Cofitness  
    1 AO353_18540 pseudouridine synthase 0.69 0.55
    2 AO353_27720 cupin 0.67 0.50
    3 AO353_04520 elongation factor 4 0.92 0.49
    4 AO353_10445 tRNA uridine 5-carboxymethylaminomethyl modification protein 0.77 0.48
    5 AO353_14740 GTP-binding protein 0.88 0.45
    6 AO353_01405 23S rRNA pseudouridylate synthase 0.81 0.44
    7 AO353_00435 transcription-repair coupling factor 0.94 0.44
    8 AO353_08200 coproporphyrinogen III oxidase 0.79 0.43
    9 AO353_26830 histidine kinase 0.39 0.43
    10 AO353_06265 DEAD/DEAH box helicase 0.36 0.43
    11 AO353_13235 YgiQ family radical SAM protein 0.31 0.43
    12 AO353_03615 cold-shock protein no 0.41
    13 AO353_04175 glycerol uptake facilitator GlpF 0.60 0.41
    14 AO353_05220 carbon-nitrogen hydrolase 0.57 0.39
    15 AO353_13140 tRNA dimethylallyltransferase 0.62 0.39
    16 AO353_01355 3-oxoacyl-ACP synthase 0.84 0.39
    17 AO353_10455 tRNA modification GTPase MnmE 0.88 0.38
    18 AO353_15875 23S rRNA (adenine(2503)-C2)-methyltransferase 0.94 0.38
    19 AO353_01980 NAD-dependent dehydratase 0.71 0.38
    20 AO353_06850 MFS transporter 0.62 0.37

    Or look for negative cofitness