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Cofit
Protein
Homologs
Top cofit genes for AO353_10810 from
Pseudomonas fluorescens FW300-N2E3
radical SAM protein
SEED: Radical SAM domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
AO353
_01050
poly(3-hydroxyalkanoate) synthetase
no
0.75
2
AO353
_08575
ABC transporter substrate-binding protein
0.20
0.61
3
AO353
_19770
peptidase
0.46
0.60
4
AO353
_01060
3-ketoacyl-ACP reductase
no
0.59
5
AO353
_15510
ribosomal subunit interface protein
no
0.58
6
AO353
_01055
AraC family transcriptional regulator
no
0.58
7
AO353
_08455
hypothetical protein
no
0.58
8
AO353
_01040
polyhydroxyalkanoate synthesis regulator
no
0.46
9
AO353
_20095
histidine kinase
no
0.45
10
AO353
_03310
long-chain fatty acid--CoA ligase
0.67
0.43
11
AO353
_15110
MFS transporter
no
0.43
12
AO353
_03420
phosphogluconate dehydratase
0.21
0.41
13
AO353
_15105
porin
0.64
0.41
14
AO353
_12930
GlcNAc-PI de-N-acetylase
0.19
0.40
15
AO353
_27690
isocitrate dehydrogenase
no
0.40
16
AO353
_06490
nicotinate-nucleotide adenylyltransferase
no
0.40
17
AO353
_16800
damage-inducible protein CinA
0.47
0.39
18
AO353
_01065
acetyl-CoA acetyltransferase
no
0.39
19
AO353
_12935
glycosyltransferase
no
0.38
20
AO353
_28000
branched-chain amino acid ABC transporter
0.38
0.37
Or look for
negative cofitness