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  • Top cofit genes for AO353_06855 from Pseudomonas fluorescens FW300-N2E3

    ABC-ATPase UvrA
    SEED: Excinuclease ABC subunit A
    KEGG: excinuclease ABC subunit A

    Rank Hit Name Description Conserved? Cofitness  
    1 AO353_20545 excinuclease ABC subunit B 0.99 0.88
    2 AO353_21835 excinuclease ABC subunit C 0.99 0.76
    3 AO353_17020 ATP-dependent DNA helicase DinG 0.84 0.72
    4 AO353_05660 DNA repair protein RecN 0.92 0.67
    5 AO353_29350 DNA polymerase II 0.85 0.66
    6 AO353_13980 DNA repair protein RadA 0.94 0.65
    7 AO353_06780 DNA repair helicase Lhr (from data) 0.31 0.64
    8 AO353_24750 DNA damage response nuclease (from data) 0.61 0.64
    9 AO353_10480 recombinase RecF 0.90 0.59
    10 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA 0.45 0.57
    11 AO353_00675 recombination protein RecR 0.94 0.56
    12 AO353_02560 recombinase RmuC 0.43 0.56
    13 AO353_24755 ATP-dependent DNA helicase 0.63 0.55
    14 AO353_02390 aminopeptidase no 0.52
    15 AO353_24010 Rhizobactin siderophore biosynthesis protein RhbE 0.36 0.52
    16 AO353_10055 DNA helicase II 0.95 0.51
    17 AO353_19235 DNA damage response gene with a putative DNA binding domain (PA0922-like) (from data) 0.60 0.50
    18 AO353_04320 single-stranded-DNA-specific exonuclease RecJ 0.82 0.50
    19 AO353_27665 arginyl-tRNA-protein transferase 0.39 0.47
    20 AO353_02515 recombination-associated protein RdgC 0.55 0.47

    Or look for negative cofitness