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  • Top cofit genes for ABZR87_RS23255 from Ralstonia sp. UNC404CL21Col

    helix-turn-helix transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 ABZR87_RS04010 methyl-accepting chemotaxis protein no 0.41
    2 ABZR87_RS04750 LysR substrate-binding domain-containing protein no 0.32
    3 ABZR87_RS04420 hypothetical protein no 0.31
    4 ABZR87_RS18005 formylglycine-generating enzyme family protein no 0.30
    5 ABZR87_RS03515 Crp/Fnr family transcriptional regulator no 0.30
    6 ABZR87_RS20130 hypothetical protein no 0.30
    7 ABZR87_RS08635 lysophospholipid acyltransferase family protein 0.41 0.29
    8 ABZR87_RS15390 NCS1 family nucleobase:cation symporter-1 0.10 0.29
    9 ABZR87_RS03270 two-component system response regulator KdpE no 0.29
    10 ABZR87_RS04580 response regulator no 0.28
    11 ABZR87_RS12030 ABC transporter permease 0.60 0.28
    12 ABZR87_RS12890 cytochrome o ubiquinol oxidase subunit I no 0.28
    13 ABZR87_RS18765 S53 family peptidase no 0.28
    14 ABZR87_RS21365 ligase-associated DNA damage response endonuclease PdeM no 0.28
    15 ABZR87_RS11970 hypothetical protein no 0.28
    16 ABZR87_RS12365 DUF1653 domain-containing protein no 0.28
    17 ABZR87_RS15240 YicC/YloC family endoribonuclease no 0.28
    18 ABZR87_RS09850 DUF1993 family protein 0.57 0.28
    19 ABZR87_RS12350 hypothetical protein no 0.28
    20 ABZR87_RS19735 hypothetical protein no 0.27

    Or look for negative cofitness