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  • Top cofit genes for ABZR87_RS21085 from Ralstonia sp. UNC404CL21Col

    glycoside hydrolase family 28 protein
    SEED: Polygalacturonase (EC 3.2.1.15)

    Rank Hit Name Description Conserved? Cofitness  
    1 ABZR87_RS08835 hypothetical protein no 0.41
    2 ABZR87_RS18075 type III secretion system export apparatus subunit SctT no 0.41
    3 ABZR87_RS07800 DUF1571 domain-containing protein 0.31 0.37
    4 ABZR87_RS18510 hypothetical protein no 0.36
    5 ABZR87_RS18765 S53 family peptidase no 0.35
    6 ABZR87_RS01335 NUDIX hydrolase no 0.34
    7 ABZR87_RS20620 hypothetical protein no 0.34
    8 ABZR87_RS20105 flagellar filament capping protein FliD no 0.34
    9 ABZR87_RS00035 ParA family protein no 0.33
    10 ABZR87_RS11255 rhodanese-like domain-containing protein 0.59 0.33
    11 ABZR87_RS22620 UdgX family uracil-DNA binding protein no 0.32
    12 ABZR87_RS23145 FAD-binding oxidoreductase no 0.32
    13 ABZR87_RS18270 XRE family transcriptional regulator no 0.32
    14 ABZR87_RS00290 GNAT family N-acetyltransferase no 0.32
    15 ABZR87_RS01660 50S ribosomal protein L11 methyltransferase no 0.31
    16 ABZR87_RS15545 MBL fold metallo-hydrolase 0.52 0.31
    17 ABZR87_RS18290 glycine zipper 2TM domain-containing protein no 0.31
    18 ABZR87_RS20120 M23 family metallopeptidase no 0.31
    19 ABZR87_RS17965 chemotaxis protein CheW no 0.31
    20 ABZR87_RS05865 threonine synthase no 0.30

    Or look for negative cofitness