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  • Top cofit genes for ABZR87_RS18150 from Ralstonia sp. UNC404CL21Col

    LuxR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 ABZR87_RS03450 type II secretion system secretin GspD no 0.37
    2 ABZR87_RS03440 type II secretion system protein GspM no 0.35
    3 ABZR87_RS03425 prepilin-type N-terminal cleavage/methylation domain-containing protein no 0.35
    4 ABZR87_RS22540 GNAT family N-acetyltransferase no 0.35
    5 ABZR87_RS03415 GspH/FimT family pseudopilin no 0.34
    6 ABZR87_RS03430 type II secretion system minor pseudopilin GspK no 0.33
    7 ABZR87_RS00020 DUF3460 family protein no 0.33
    8 ABZR87_RS13095 hypothetical protein no 0.32
    9 ABZR87_RS20075 DUF2892 domain-containing protein no 0.32
    10 ABZR87_RS03455 type II secretion system ATPase GspE no 0.32
    11 ABZR87_RS06120 LysR family transcriptional regulator no 0.31
    12 ABZR87_RS03435 type II secretion system protein GspL no 0.31
    13 ABZR87_RS03410 type II secretion system major pseudopilin GspG no 0.31
    14 ABZR87_RS11690 ATP-binding cassette domain-containing protein no 0.30
    15 ABZR87_RS03460 type II secretion system inner membrane protein GspF no 0.30
    16 ABZR87_RS14035 metalloregulator ArsR/SmtB family transcription factor no 0.30
    17 ABZR87_RS20880 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase no 0.29
    18 ABZR87_RS01855 A24 family peptidase no 0.29
    19 ABZR87_RS21185 acyltransferase no 0.29
    20 ABZR87_RS05775 hypothetical protein no 0.29

    Or look for negative cofitness