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  • Top cofit genes for ABZR87_RS09080 from Ralstonia sp. UNC404CL21Col

    phage holin family protein
    SEED: Probable transmembrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 ABZR87_RS09085 DUF883 family protein 0.83 0.78
    2 ABZR87_RS09075 DUF3318 domain-containing protein 0.78 0.53
    3 ABZR87_RS09625 CobD/CbiB family protein 0.65 0.52
    4 ABZR87_RS02400 Do family serine endopeptidase 0.55 0.46
    5 ABZR87_RS07675 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU 0.41 0.43
    6 ABZR87_RS22315 porin no 0.41
    7 ABZR87_RS09160 GMC family oxidoreductase no 0.38
    8 ABZR87_RS11000 transaldolase no 0.38
    9 ABZR87_RS16125 heme biosynthesis protein HemY 0.69 0.37
    10 ABZR87_RS15950 pyrroloquinoline-quinone synthase PqqC no 0.36
    11 ABZR87_RS02390 large conductance mechanosensitive channel protein MscL no 0.35
    12 ABZR87_RS22690 XRE family transcriptional regulator no 0.35
    13 ABZR87_RS09930 polyhydroxyalkanoate depolymerase 0.40 0.34
    14 ABZR87_RS03280 porin no 0.34
    15 ABZR87_RS12585 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein no 0.34
    16 ABZR87_RS10065 hypothetical protein no 0.34
    17 ABZR87_RS00435 ATP-dependent Clp protease ATP-binding subunit ClpA 0.48 0.33
    18 ABZR87_RS18985 GGDEF and EAL domain-containing protein no 0.33
    19 ABZR87_RS08960 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG no 0.33
    20 ABZR87_RS21815 MarR family winged helix-turn-helix transcriptional regulator no 0.33

    Or look for negative cofitness