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  • Top cofit genes for ABZR87_RS07035 from Ralstonia sp. UNC404CL21Col

    RNase adapter RapZ
    SEED: Hypothetical ATP-binding protein UPF0042, contains P-loop
    KEGG: UPF0042 nucleotide-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 ABZR87_RS04940 PAS domain-containing sensor histidine kinase 0.61 0.75
    2 ABZR87_RS14965 DUF3619 family protein 0.43 0.70
    3 ABZR87_RS02850 elongation factor Tu no 0.67
    4 ABZR87_RS21795 NUDIX domain-containing protein 0.58 0.66
    5 ABZR87_RS10190 translation elongation factor 4 0.82 0.66
    6 ABZR87_RS16960 HAMP domain-containing sensor histidine kinase 0.82 0.66
    7 ABZR87_RS08985 Tol-Pal system beta propeller repeat protein TolB 0.65 0.64
    8 ABZR87_RS02655 anti-sigma factor 0.37 0.62
    9 ABZR87_RS14605 aconitate hydratase AcnA 0.45 0.62
    10 ABZR87_RS08970 protein TolQ 0.57 0.62
    11 ABZR87_RS10170 RseA family anti-sigma factor 0.60 0.62
    12 ABZR87_RS06350 thiol:disulfide interchange protein DsbA/DsbL 0.64 0.61
    13 ABZR87_RS02220 redox-regulated ATPase YchF 0.75 0.61
    14 ABZR87_RS08695 capsular polysaccharide biosynthesis protein CapF no 0.60
    15 ABZR87_RS09940 excinuclease ABC subunit UvrB 0.79 0.59
    16 ABZR87_RS02385 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.74 0.59
    17 ABZR87_RS14970 DUF3106 domain-containing protein 0.72 0.58
    18 ABZR87_RS04975 peptide deformylase 0.88 0.58
    19 ABZR87_RS10245 excinuclease ABC subunit UvrC 0.43 0.57
    20 ABZR87_RS12785 endopeptidase La 0.85 0.57

    Or look for negative cofitness