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  • Top cofit genes for ABZR87_RS02415 from Ralstonia sp. UNC404CL21Col

    response regulator
    SEED: Tricarboxylate transport transcriptional regulator TctD
    KEGG: two-component system, OmpR family, response regulator TctD

    Rank Hit Name Description Conserved? Cofitness  
    1 ABZR87_RS02430 iron ABC transporter permease no 0.52
    2 ABZR87_RS02420 sensor histidine kinase 0.35 0.48
    3 ABZR87_RS19760 DUF2282 domain-containing protein no 0.47
    4 ABZR87_RS02425 ABC transporter substrate-binding protein 0.29 0.41
    5 ABZR87_RS01055 heat-inducible transcriptional repressor HrcA no 0.40
    6 ABZR87_RS07325 AMP-binding protein no 0.40
    7 ABZR87_RS14750 urease accessory protein UreD no 0.40
    8 ABZR87_RS15000 TetR/AcrR family transcriptional regulator no 0.40
    9 ABZR87_RS07490 DegV family protein no 0.39
    10 ABZR87_RS23515 sigma-54 dependent transcriptional regulator no 0.37
    11 ABZR87_RS19555 type II secretion system F family protein 0.45 0.37
    12 ABZR87_RS02435 ABC transporter ATP-binding protein no 0.37
    13 ABZR87_RS01035 histidine utilization repressor no 0.37
    14 ABZR87_RS06735 bacterioferritin no 0.36
    15 ABZR87_RS12380 MFS transporter no 0.36
    16 ABZR87_RS14415 hemin uptake protein HemP no 0.36
    17 ABZR87_RS12400 M20 aminoacylase family protein no 0.35
    18 ABZR87_RS03015 DeoR/GlpR family DNA-binding transcription regulator no 0.35
    19 ABZR87_RS20725 alpha/beta fold hydrolase no 0.35
    20 ABZR87_RS19545 CpaF family protein no 0.35

    Or look for negative cofitness