Top cofit genes for ABZR86_RS00080 from Dyella japonica UNC79MFTsu3.2

helix-turn-helix domain-containing protein
SEED: Transcriptional regulator, ArsR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	ABZR86_RS01835		hypothetical protein	no	0.69
2	ABZR86_RS15360		YbhB/YbcL family Raf kinase inhibitor-like protein	no	0.65
3	ABZR86_RS11810		pilus assembly protein PilM	no	0.62
4	ABZR86_RS09205		PilW family protein	no	0.62
5	ABZR86_RS10040		type IV-A pilus assembly ATPase PilB	no	0.61
6	ABZR86_RS01820		YoaK family protein	no	0.61
7	ABZR86_RS15720		GspE/PulE family protein	no	0.60
8	ABZR86_RS11790		type IV pilus secretin PilQ	no	0.60
9	ABZR86_RS14825		LytTR family DNA-binding domain-containing protein	0.71	0.60
10	ABZR86_RS08805		EAL domain-containing protein	no	0.59
11	ABZR86_RS17385		NAD(P)-dependent oxidoreductase	no	0.59
12	ABZR86_RS09195		PilC/PilY family type IV pilus protein	no	0.58
13	ABZR86_RS10045		type II secretion system F family protein	0.23	0.58
14	ABZR86_RS02715		response regulator	no	0.57
15	ABZR86_RS15890		TetR/AcrR family transcriptional regulator	0.39	0.57
16	ABZR86_RS11800		type 4a pilus biogenesis protein PilO	no	0.57
17	ABZR86_RS14300		PAS and helix-turn-helix domain-containing protein	no	0.56
18	ABZR86_RS17380		LON peptidase substrate-binding domain-containing protein	no	0.55
19	ABZR86_RS09190		type IV pilin protein	no	0.55
20	ABZR86_RS19095		hybrid sensor histidine kinase/response regulator	no	0.54

Or look for negative cofitness