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Cofit
Protein
Homologs
Top cofit genes for ABIE53_005682 from
Paraburkholderia graminis OAS925
putative lipoprotein YmbA
SEED: probable lipoprotein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABIE53
_006077
L-fuconolactonase
no
0.33
2
ABIE53
_004425
hypothetical protein
no
0.32
3
ABIE53
_000796
aminoglycoside/choline kinase family phosphotransferase
no
0.30
4
ABIE53
_005077
DNA-binding transcriptional LysR family regulator
no
0.30
5
ABIE53
_001532
hypothetical protein
no
0.29
6
ABIE53
_003228
transcription elongation factor GreB
no
0.29
7
ABIE53
_001913
D-galactonate transporter
no
0.29
8
ABIE53
_004708
transcriptional regulator with PAS, ATPase and Fis domain
no
0.29
9
ABIE53
_006436
putative porin
no
0.29
10
ABIE53
_006415
hypothetical protein
no
0.29
11
ABIE53
_006080
glycosyltransferase involved in cell wall biosynthesis
no
0.28
12
ABIE53
_005055
hypothetical protein
no
0.28
13
ABIE53
_006435
hypothetical protein
no
0.28
14
ABIE53
_004423
uncharacterized protein YecT (DUF1311 family)
no
0.28
15
ABIE53
_005625
MHS family proline/betaine transporter-like MFS transporter
no
0.28
16
ABIE53
_001887
glycine/D-amino acid oxidase-like deaminating enzyme
no
0.28
17
ABIE53
_004917
threonine/homoserine/homoserine lactone efflux protein
no
0.28
18
ABIE53
_005659
alkyl sulfatase BDS1-like metallo-beta-lactamase superfamily hydrolase
no
0.27
19
ABIE53
_000158
hypothetical protein
no
0.27
20
ABIE53
_005411
type I restriction enzyme S subunit
no
0.27
Or look for
negative cofitness