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Cofit
Protein
Homologs
Top cofit genes for ABIE53_001637 from
Paraburkholderia graminis OAS925
hypothetical protein
SEED: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABIE53
_003338
RNA polymerase sigma factor (sigma-70 family)
0.35
0.33
2
ABIE53
_000900
DNA-binding IclR family transcriptional regulator
no
0.32
3
ABIE53
_003849
tRNA-Arg
no
0.31
4
ABIE53
_003540
16S rRNA (uracil1498-N3)-methyltransferase
no
0.30
5
ABIE53
_006339
phenylacetaldehyde dehydrogenase
no
0.30
6
ABIE53
_006546
DNA-binding GntR family transcriptional regulator
no
0.29
7
ABIE53
_000107
putative RNase H-like HicB family nuclease
no
0.28
8
ABIE53
_003846
tRNA-Asn
no
0.28
9
ABIE53
_003291
large subunit ribosomal protein L33
no
0.27
10
ABIE53
_002062
23S rRNA pseudouridine1911/1915/1917 synthase
no
0.26
11
ABIE53
_002431
DNA-binding NtrC family response regulator
no
0.26
12
ABIE53
_001846
TetR/AcrR family transcriptional repressor of nem operon
no
0.25
13
ABIE53
_005285
HSP20 family protein
no
0.25
14
ABIE53
_006482
AcrR family transcriptional regulator
no
0.25
15
ABIE53
_006458
type VI secretion system protein ImpC
no
0.24
16
ABIE53
_003112
hypothetical protein
no
0.24
17
ABIE53
_000672
putative membrane protein
no
0.23
18
ABIE53
_001023
hypothetical protein
no
0.23
19
ABIE53
_002791
dihydrolipoamide dehydrogenase
no
0.23
20
ABIE53
_000844
glycolate oxidase
no
0.23
Or look for
negative cofitness