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Cofit
Protein
Homologs
Top cofit genes for ABIE53_000022 from
Paraburkholderia graminis OAS925
hypothetical protein
SEED: Autotransporter adhesin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABIE53
_000023
outer membrane protein
0.41
0.77
2
ABIE53
_000021
hypothetical protein
0.43
0.62
3
ABIE53
_001566
AcrR family transcriptional regulator
no
0.39
4
ABIE53
_005199
AraC family transcriptional activator FtrA
no
0.26
5
ABIE53
_002448
uncharacterized protein (DUF2147 family)
no
0.24
6
ABIE53
_000067
choline dehydrogenase-like flavoprotein
0.41
0.24
7
ABIE53
_000036
tRNA 2-thiocytidine biosynthesis protein TtcA
0.43
0.24
8
ABIE53
_000387
DNA processing protein
0.40
0.23
9
ABIE53
_000411
hypothetical protein
no
0.22
10
ABIE53
_005423
TetR/AcrR family transcriptional repressor of nem operon
no
0.22
11
ABIE53
_003140
acylglycerol lipase
no
0.22
12
ABIE53
_004326
acyl homoserine lactone synthase
no
0.21
13
ABIE53
_003203
outer membrane lipoprotein-sorting protein
no
0.21
14
ABIE53
_001082
two-component system probable response regulator PhcQ
0.30
0.20
15
ABIE53
_002415
AcrR family transcriptional regulator
no
0.20
16
ABIE53
_004440
hypothetical protein
no
0.20
17
ABIE53
_005991
SET family sugar efflux transporter-like MFS transporter
no
0.20
18
ABIE53
_000011
Lrp/AsnC family leucine-responsive transcriptional regulator
no
0.20
19
ABIE53
_004701
membrane protein DedA with SNARE-associated domain/rhodanese-related sulfurtransferase
no
0.20
20
ABIE53
_000152
glycosyltransferase involved in cell wall biosynthesis
no
0.19
Or look for
negative cofitness