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Cofit
Protein
Homologs
Top cofit genes for ABIE53_000021 from
Paraburkholderia graminis OAS925
hypothetical protein
SEED: Autotransporter adhesin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABIE53
_000022
hypothetical protein
0.26
0.62
2
ABIE53
_000023
outer membrane protein
0.31
0.60
3
ABIE53
_001566
AcrR family transcriptional regulator
0.65
0.28
4
ABIE53
_000821
paraquat-inducible protein A
no
0.21
5
ABIE53
_000036
tRNA 2-thiocytidine biosynthesis protein TtcA
0.69
0.21
6
ABIE53
_005055
hypothetical protein
no
0.21
7
ABIE53
_002962
DNA-binding transcriptional LysR family regulator
no
0.21
8
ABIE53
_004493
glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily II)
no
0.20
9
ABIE53
_000425
23S rRNA (cytosine1962-C5)-methyltransferase
no
0.20
10
ABIE53
_003523
glutamate-5-semialdehyde dehydrogenase
no
0.20
11
ABIE53
_003846
tRNA-Asn
no
0.20
12
ABIE53
_001720
LysR family transcriptional regulator of abg operon
no
0.20
13
ABIE53
_004735
CspA family cold shock protein
no
0.20
14
ABIE53
_004826
1,4-alpha-glucan branching enzyme
no
0.20
15
ABIE53
_006138
glycine hydroxymethyltransferase
no
0.19
16
ABIE53
_005534
DNA-binding transcriptional LysR family regulator
no
0.19
17
ABIE53
_003368
antitoxin VapB
no
0.19
18
ABIE53
_000195
hypothetical protein
no
0.19
19
ABIE53
_000592
isocitrate dehydrogenase kinase/phosphatase
no
0.19
20
ABIE53
_002406
thiosulfate reductase cytochrome b subunit
no
0.19
Or look for
negative cofitness