Top cofit genes for ABCV34_RS12255 from Castellaniella sp019104865 MT123

TRAP transporter small permease

Rank Hit Name Description Conserved? Cofitness  
1 ABCV34_RS08440 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase no 0.74
2 ABCV34_RS12540 TRAP transporter permease no 0.72
3 ABCV34_RS02365 polyamine ABC transporter ATP-binding protein 0.44 0.69
4 ABCV34_RS12545 TAXI family TRAP transporter solute-binding subunit no 0.68
5 ABCV34_RS07410 LacI family DNA-binding transcriptional regulator no 0.68
6 ABCV34_RS13735 phenylacetic acid degradation operon negative regulatory protein PaaX no 0.66
7 ABCV34_RS07940 alpha/beta fold hydrolase no 0.66
8 ABCV34_RS09065 molecular chaperone HtpG no 0.66
9 ABCV34_RS00220 assimilatory sulfite reductase (NADPH) flavoprotein subunit no 0.65
10 ABCV34_RS15495 ABC transporter permease no 0.64
11 ABCV34_RS08075 acyl-CoA dehydrogenase C-terminal domain-containing protein 0.38 0.64
12 ABCV34_RS09420 OsmC family protein no 0.64
13 ABCV34_RS04125 disulfide bond formation protein B no 0.63
14 ABCV34_RS01415 TetR/AcrR family transcriptional regulator no 0.63
15 ABCV34_RS15780 cation acetate symporter no 0.63
16 ABCV34_RS03600 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.42 0.63
17 ABCV34_RS04470 sensor histidine kinase N-terminal domain-containing protein no 0.62
18 ABCV34_RS01330 CHAD domain-containing protein no 0.62
19 ABCV34_RS08475 ABC transporter ATP-binding protein no 0.62
20 ABCV34_RS11150 glutamate synthase-related protein no 0.62

Or look for negative cofitness