Top cofit genes for BT4643 from Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

Rank	Hit	Name	Description	Conserved?	Cofitness
1	BT1533		conserved hypothetical protein (NCBI ptt file)	no	0.32
2	BT2463		RNA polymerase ECF-type sigma factor (NCBI ptt file)	no	0.32
3	BT2905		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	no	0.31
4	BT4180		acetyl xylan esterase A (NCBI ptt file)	no	0.31
5	BT4571		RNA polymerase ECF-type sigma factor (NCBI ptt file)	no	0.30
6	BT3483		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	no	0.29
7	BT1417		cytochrome C552 precursor (NCBI ptt file)	no	0.29
8	BT1112		transposase (NCBI ptt file)	no	0.29
9	BT2612		hypothetical protein (NCBI ptt file)	no	0.28
10	BT1898		hypothetical protein (NCBI ptt file)	no	0.28
11	BT4484		conserved hypothetical protein (NCBI ptt file)	no	0.28
12	BT3486		N-acetylgalactosamine-6-sulfatase precursor (NCBI ptt file)	no	0.28
13	BT3030		conserved hypothetical protein with conserved domains (NCBI ptt file)	no	0.27
14	BT1403		1-deoxy-D-xylulose 5-phosphate synthase (NCBI ptt file)	no	0.27
15	BT1780		periplasmic beta-glucosidase precursor (NCBI ptt file)	no	0.27
16	BT1899		conserved hypothetical protein (NCBI ptt file)	no	0.27
17	BT2298		conserved protein found in conjugate transposon (NCBI ptt file)	no	0.27
18	p5482_03		hypothetical protein (NCBI)	no	0.26
19	BT3129		putative flagellar motor protein MotB (NCBI ptt file)	no	0.26
20	BT4155		conserved hypothetical protein (NCBI ptt file)	no	0.26

Or look for negative cofitness