Top cofit genes for BT3992 from Bacteroides thetaiotaomicron VPI-5482

putative anti-sigma factor (NCBI ptt file)
SEED: Putative anti-sigma factor

Rank	Hit	Name	Description	Conserved?	Cofitness
1	BT0900		putative tetratricopeptide repeat family protein (NCBI ptt file)	0.59	0.58
2	BT1747		pyruvate-flavodoxin oxidoreductase (NCBI ptt file)	0.38	0.53
3	BT1733		putative phosphoribosylformylglycinamidine synthase (NCBI ptt file)	0.42	0.52
4	BT2059		TonB (NCBI ptt file)	no	0.52
5	BT3845		inosine-5'-monophosphate dehydrogenase (NCBI ptt file)	no	0.51
6	BT4211		putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file)	no	0.50
7	BT4265		GMP synthase (glutamine-hydrolyzing) (NCBI ptt file)	no	0.50
8	BT4706		putative anti-sigma factor (NCBI ptt file)	0.44	0.49
9	BT2741		sigma-54 modulation protein (NCBI ptt file)	no	0.48
10	BT0173		conserved hypothetical protein (NCBI ptt file)	no	0.47
11	BT0619		Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfD (NCBI ptt file)	no	0.47
12	BT3978		putative cardiolipin synthetase (NCBI ptt file)	no	0.47
13	BT_2008		hypothetical protein (RefSeq)	no	0.47
14	BT3253		phosphoribosylamine--glycine ligase (NCBI ptt file)	no	0.46
15	BT1843		adenylosuccinate synthetase (NCBI ptt file)	no	0.46
16	BT1326		TPR-domain containing protein (NCBI ptt file)	no	0.46
17	BT3550		putative long-chain-fatty-acid--CoA ligase (NCBI ptt file)	no	0.45
18	BT0618		Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfC (NCBI ptt file)	no	0.45
19	BT1759		levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file)	no	0.45
20	BT3221		hypothetical protein (NCBI ptt file)	no	0.44

Or look for negative cofitness