Top cofit genes for BT3843 from Bacteroides thetaiotaomicron VPI-5482

ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file)
SEED: ATP-dependent Clp protease ATP-binding subunit ClpX
KEGG: ATP-dependent Clp protease ATP-binding subunit ClpX

Rank	Hit	Name	Description	Conserved?	Cofitness
1	BT2040		hypothetical protein (NCBI ptt file)	no	0.48
2	BT2090		methylmalonyl-CoA mutase large subunit (NCBI ptt file)	0.91	0.45
3	BT1480		hypothetical protein (NCBI ptt file)	no	0.44
4	BT2091		methylmalonyl-CoA mutase small subunit (NCBI ptt file)	0.37	0.44
5	BT2161		50S ribosomal protein L9 (NCBI ptt file)	0.73	0.44
6	BT4331		conserved hypothetical protein (NCBI ptt file)	no	0.43
7	BT0176		conserved hypothetical protein (NCBI ptt file)	no	0.43
8	BT0933		hypothetical protein (NCBI ptt file)	no	0.41
9	p5482_19		hypothetical protein (NCBI)	no	0.40
10	BT3656		putative beta-xylosidase (NCBI ptt file)	no	0.40
11	BT4610		RecA (NCBI ptt file)	no	0.39
12	BT3431		DNA repair protein (NCBI ptt file)	no	0.39
13	BT4531		conserved hypothetical protein (NCBI ptt file)	no	0.39
14	BT0155		putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file)	no	0.39
15	BT3689		conserved hypothetical protein (NCBI ptt file)	0.43	0.38
16	BT2573		glutamate/gamma-aminobutyrate anti-porter (NCBI ptt file)	no	0.38
17	BT2062		6-phosphofructokinase (NCBI ptt file)	0.61	0.38
18	BT2146		4-alpha-glucanotransferase (NCBI ptt file)	0.45	0.38
19	BT0547		aspartate aminotransferase (NCBI ptt file)	no	0.38
20	BT2986		integrase (NCBI ptt file)	no	0.38

Or look for negative cofitness