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Cofit
Protein
Homologs
Top cofit genes for BT3329 from
Bacteroides thetaiotaomicron VPI-5482
hypothetical protein (NCBI ptt file)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
BT3334
two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file)
no
0.63
2
BT3332
TonB-dependent receptor for chondroitin sulfate and hyaluronic acid (susC-like)
(from data)
no
0.62
3
BT3331
Outer membrane binding protein for chondroitin sulfate and hyaluronic acid (susD-like)
(from data)
no
0.57
4
BT3330
hypothetical protein (NCBI ptt file)
no
0.46
5
BT4410
endo-hyaluronase
(from data)
no
0.38
6
BT3350
putative chondroitinase (chondroitin lyase) (NCBI ptt file)
no
0.31
7
BT4443
N-acetylmuramoyl alanine amidase (NCBI ptt file)
no
0.28
8
BT4411
predicted hyaluronic acid binding protein (DUF4627)
(from data)
no
0.28
9
BT3328
hyaluronic acid endo-lyase (PL29)
(from data)
no
0.26
10
BT2655
hypothetical protein (NCBI ptt file)
no
0.24
11
BT3974
conserved hypothetical protein (NCBI ptt file)
no
0.24
12
BT4332
conserved hypothetical protein (NCBI ptt file)
no
0.23
13
BT3632
hypothetical protein (NCBI ptt file)
no
0.22
14
BT2971
two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file)
no
0.22
15
BT0014
rteA, two-component system histidine kinase, with response regulator receiver domain (NCBI ptt file)
no
0.21
16
BT3353
Snf2 family helicase (NCBI ptt file)
no
0.21
17
BT3618
conserved hypothetical protein (NCBI ptt file)
no
0.20
18
BT3293
beta-galactosidase (NCBI ptt file)
no
0.20
19
BT3349
chondroitin disaccharide sulfatase
(from data)
no
0.20
20
p5482
_06
mobilization protein A (NCBI)
no
0.19
Or look for
negative cofitness