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  • Top cofit genes for BT3308 from Bacteroides thetaiotaomicron VPI-5482

    putative zinc protease ymxG (NCBI ptt file)
    SEED: FIG007959: peptidase, M16 family
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 BT0252 transcription-repair coupling factor (NCBI ptt file) 0.38 0.39
    2 p5482_13 hypothetical protein (NCBI) no 0.38
    3 BT3843 ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) 0.43 0.35
    4 BT2986 integrase (NCBI ptt file) no 0.35
    5 BT3356 6-phosphofructokinase (NCBI ptt file) no 0.35
    6 BT2040 hypothetical protein (NCBI ptt file) no 0.33
    7 BT0416 conserved hypothetical protein (NCBI ptt file) no 0.32
    8 BT2091 methylmalonyl-CoA mutase small subunit (NCBI ptt file) no 0.32
    9 BT2062 6-phosphofructokinase (NCBI ptt file) no 0.31
    10 BT2438 hypothetical protein (NCBI ptt file) no 0.31
    11 BT3645 two-component system sensor histidine kinase (NCBI ptt file) no 0.30
    12 BT4315 HPr(Ser) phosphatase (NCBI ptt file) no 0.30
    13 BT3431 DNA repair protein (NCBI ptt file) no 0.29
    14 BT4508 hypothetical protein (NCBI ptt file) no 0.29
    15 BT3525 hypothetical protein (NCBI ptt file) no 0.29
    16 BT2437 hypothetical protein (NCBI ptt file) no 0.29
    17 BT1091 cation-transporting ATPase pacS (NCBI ptt file) no 0.29
    18 BT4610 RecA (NCBI ptt file) no 0.29
    19 BT2969 beta-galactosidase (NCBI ptt file) no 0.28
    20 BT3607 hypothetical protein (NCBI ptt file) no 0.28

    Or look for negative cofitness