Top cofit genes for BT3081 from Bacteroides thetaiotaomicron VPI-5482

putative pectin degradation protein (NCBI ptt file)
SEED: Pectin degradation protein KdgF

Rank	Hit	Name	Description	Conserved?	Cofitness
1	BT2383		RNA polymerase ECF-type sigma factor (NCBI ptt file)	no	0.29
2	BT3523		hypothetical protein (NCBI ptt file)	0.44	0.28
3	BT2217		hypothetical protein (NCBI ptt file)	no	0.27
4	p5482_35		hypothetical protein (NCBI)	no	0.26
5	BT4165		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	no	0.26
6	BT1172		DNA primase/helicase (NCBI ptt file)	no	0.26
7	BT4605		conserved hypothetical protein (NCBI ptt file)	no	0.26
8	BT2505		conserved hypothetical protein (NCBI ptt file)	no	0.25
9	BT3959		conserved hypothetical protein, putative outer membrane protein (NCBI ptt file)	no	0.25
10	BT2372		transcriptional regulator (NCBI ptt file)	no	0.25
11	BT0114		putative symporter, arsenic resistance membrane protein (NCBI ptt file)	no	0.24
12	BT3023		conserved hypothetical protein (NCBI ptt file)	no	0.24
13	BT4697		transcriptional regulator (NCBI ptt file)	no	0.24
14	BT3602		hypothetical protein (NCBI ptt file)	no	0.24
15	BT2028		conserved hypothetical protein (NCBI ptt file)	no	0.24
16	BT2606		conserved hypothetical protein (NCBI ptt file)	no	0.23
17	BT2628		two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file)	0.37	0.23
18	BT0754		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	no	0.23
19	BT3163		alpha-glucosidase, putative (NCBI ptt file)	no	0.23
20	BT3384		hypothetical protein (NCBI ptt file)	no	0.23

Or look for negative cofitness