Top cofit genes for BT2446 from Bacteroides thetaiotaomicron VPI-5482

integrase (NCBI ptt file)
SEED: Integrase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	BT2855		beta-mannosidase precursor (NCBI ptt file)	no	0.22
2	BT3045		hypothetical protein (NCBI ptt file)	no	0.22
3	BT2474		cytochrome c biogenesis protein ccsA (NCBI ptt file)	no	0.22
4	BT1532		ABC transporter permease (NCBI ptt file)	no	0.22
5	BT1740		hypothetical protein (NCBI ptt file)	no	0.22
6	BT2546		transcriptional regulator (NCBI ptt file)	no	0.21
7	BT2600		conserved protein found in conjugate transposon (NCBI ptt file)	no	0.21
8	BT2858		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	no	0.20
9	BT4030		hypothetical protein (NCBI ptt file)	no	0.20
10	BT1371		2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file)	no	0.20
11	BT3049		two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file)	no	0.20
12	BT0531		anthranilate synthase component II (NCBI ptt file)	no	0.20
13	BT3133		alpha-galactosidase (NCBI ptt file)	no	0.20
14	BT2990		hypothetical protein (NCBI ptt file)	no	0.20
15	BT4165		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	no	0.20
16	BT0532		anthranilate synthase component I (NCBI ptt file)	no	0.20
17	BT3594		conserved hypothetical protein (NCBI ptt file)	no	0.20
18	BT2675		hypothetical protein (NCBI ptt file)	no	0.20
19	BT0533		tryptophan synthase beta chain (NCBI ptt file)	no	0.19
20	p5482_23		hypothetical protein (NCBI)	no	0.19

Or look for negative cofitness